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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs73168712 chr13:24833743 T/C 6.14E-5 400 15.2 17.2 8.07 KM Plot
LGG rs7319779 chr13:48568014 T/C 1.25E-5 406 15.37 15.22 4.17 KM Plot
LGG rs732214 chr12:69815826 T/C 0.000197 405 15.18 16.33 10.5 KM Plot
LGG rs73297195 chr5:155988127 C/T 3.9E-5 406 15.67 15.17 15.23 KM Plot
LGG rs7334843 chr13:93296384 C/T 3.63E-5 407 8.97 12.28 15.68 KM Plot
LGG rs73381769 chr22:19389023 A/G 1.98E-9 406 15.48 14.53 3.2 KM Plot
LGG rs73396550 chr6:28041977 A/G 8.38E-5 406 15.25 14.78 17.18 KM Plot
LGG rs73406362 chr11:2977633 A/C 0.000103 403 15.6 14.75 11.8 KM Plot
LGG rs73406366 chr11:2986185 C/T 0.000168 398 15.6 13.7 11.8 KM Plot
LGG rs73407868 chr6:36022311 T/A 1.07E-9 406 15.63 15.13 6.15 KM Plot
LGG rs73407870 chr6:36028247 T/C 1.0E-9 406 15.67 14.95 6.15 KM Plot
LGG rs73407871 chr6:36028643 T/C 1.0E-9 406 15.67 14.95 6.15 KM Plot
LGG rs73407876 chr6:36033920 C/T 1.07E-9 406 15.63 15.13 6.15 KM Plot
LGG rs73409842 chr6:36051413 C/T 9.43E-10 406 15.67 15.15 6.15 KM Plot
LGG rs73478558 chr6:46932751 G/C 1.51E-5 407 15.03 16.73 12.5 KM Plot